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Family Forest Owners’ Perception of Management and Thinning Operations in Young Dense Forests: A Survey from Sweden
harvesting biomass bioenergy attitudes small-scale forestry
2024/1/19
A Mediterranean holm oak forest was subjected to experimental partial rainfall exclusion during 21 consecutive years to study the effects of the expected decrease in water availability for Mediterrane...
p24 family proteins are involved in transport to the plasma membrane of GPI-anchored proteins in plants
Arabidopsis p24 family endoplasmic reticulum glycosylphosphatidylinositol (GPI)
2023/12/19
p24 proteins are a family of type-I membrane proteins which cycle between the endoplasmic reticulum (ER) and the Golgi apparatus via Coat Protein I (COPI)- and COPII-coated vesicles. They have been pr...
Phylogenetic and ion-response analyses reveal a relationship between gene expansion and functional divergence in the Ca2+/cation antiporter family in Angiosperms
Ca2+/cation antiporters superfamily (CaCAs) Phylogenetic analyses Selective expansion Expression divergence Ion-response pattern Functional divergence
2023/12/18
Plants and animals face different environmental stresses but share conserved Ca2+ signaling pathways, such as Ca2+/Cation transport. The Ca2+/cation antiporters superfamily (CaCAs) is an ancient and w...
Genome-wide analysis and expression profile of the bZIP gene family in poplar
Poplar bZIP gene family Tissue-differential expression Salt stress Co-expression analysis
2023/12/8
The bZIP gene family, which is widely present in plants, participates in varied biological processes including growth and development and stress responses. How do the genes regulate such biological pr...
Mapping and engineering of auxin-induced plasma membrane dissociation in BRX family proteins
BRX BREVIS RADIX (BRX) phloem development auxin-responsive biological activity
2023/12/4
Angiosperms have evolved the phloem for the long-distance transport of metabolites. The complex process of phloem development involves genes that only occur in vascular plant lineages. For example, in...
MYB transcription factor family in sweet cherry (Prunus avium L.): genome-wide investigation, evolution, structure, characterization and expression patterns
MYB transcription factors PavMYB genes Phylogenetic analysis Expression pattern Dormancy
2023/11/30
MYB Transcription factors (TFs) are most imperative and largest gene family in plants, which participate in development, metabolism, defense, differentiation and stress response. The MYB TFs has been ...
OsPP65 Negatively Regulates Osmotic and Salt Stress Responses Through Regulating Phytohormone and Raffinose Family Oligosaccharide Metabolic Pathways in Rice
PP2C Osmotic stress tolerance ABA JA Raffinose family oligosaccharide Rice
2023/4/21
Although type 2C protein phosphatases (PP2Cs) have been demonstrated to play important roles in regulating plant development and various stress responses, their specific roles in rice abiotic stress t...
The XTH Gene Family in Schima superba: Genome-Wide Identification, Expression Profiles, and Functional Interaction Network Analysis
XTH Gene Family Genome-Wide Identification Schima superba
2023/6/2
Xyloglucan endotransglucosylase/hydrolase (XTH), belonging to glycoside hydrolase family 16, is one of the key enzymes in plant cell wall remodeling. Schima superba is an important timber and fireproo...
Genome-wide identification of NF-YA gene family in cotton and the positive role of GhNF-YA10 and GhNF-YA23 in salt tolerance
全基因组分析 雷蒙德氏棉 亚洲棉 海岛棉 陆地棉
2024/5/17
本研究基于全基因组分析，在雷蒙德氏棉、亚洲棉、海岛棉和陆地棉基因组中分别鉴定得到16、16、31和29个NF-YA基因。通过进化树分析将NF-YA基因分为4个亚组。结构分析表明NF-YA基因在棉属进化过程中相对保守。荧光定量显示GhNF-YAs可能通过ABA和 MeJA的调控通路响应盐和干旱。VIGS沉默GhNF-YA10和GhNF-YA23的表达，能显著降低棉花对盐的抗性，表明这两个基...
A comprehensive identification and function analysis of the ATBS1 Interacting Factors (AIFs) gene family of Gossypium species in fiber development and under multiple stresses
AIFs基因 棉花 纤维发育 非生物胁迫响应
2024/4/16
ATBS1 INTERACTING FACTORs (AIFs)基因是一类bHLH蛋白，在植物生长发育过程中起着重要作用。本研究在亚洲棉、雷蒙德氏棉、陆地棉和海岛棉中分别鉴定得到8, 11, 16和15 AIFs。在该家族基因启动子中发现了多个与生长发育、胁迫和激素相关的启动元件。转录组数据显示该家族基因在棉花的花器官和纤维中高量表达。荧光定量表明该家族基因在纤维起始阶段高量表达。激素处理显示该家...
Cotton DMP gene family: characterization, evolution, and expression profiles during development and stress
棉花 DMP 基因家族 系统分析
2024/4/16
对16种植物的174个DMP基因的系统发育进行分析，这可分为5个亚家族(I-V)；4个棉种包括58个DMP基因，大部分棉花DMP主要在生殖器官(萼片、花瓣、雌蕊和花药)和次生细胞壁期纤维中表达；基因互作网络表明：DMP作为一种内膜系统参与植物衰老过程和花的生殖发育。本研究对棉花DMP基因家族进行了系统分析，探究了候选基因的潜在功能。
Systematical characterization of YUCCA gene family in five cotton species, and potential functions of YUCCA22 gene in drought resistance of cotton
棉花 YUC基因家族 生长素合成
2024/5/17
生长素在植物的正常生长发育中起着至关重要的作用。TAA/YUCCA基因家族编码色氨酸氨基转移酶（tryptophan aminotransferase），是生长素合成的关键酶。然而，棉花中YUCCA（YUC）基因家族尚未见报道。为了揭示YUC基因在棉花中的功能，我们系统地鉴定了五个棉种中的YUC基因家族，包括成员分析、特征描述、基因组内复制和共线关系。转录组学分析表明，GhYUCs参与了棉花的非生...
The laurel family within the Magnoliids has attracted attentions owing to its scents, variable inflorescences, and controversial phylogenetic position. Here, we present a chromosome-level assembly of ...
Identification, Expression Analysis of the Hsf Family, and Characterization of Class A4 in Sedum Alfredii Hance under Cadmium Stress
Hsf Family Class A4 Expression Analysis Sedum Alfredii Hance Cadmium Stress
2023/6/5
Sedum alfredii Hance, a cadmium (Cd)/zinc (Zn)/lead (Pb) co-hyperaccumulating species, is a promising phytoremediation candidate because it accumulates substantial amounts of heavy metal ions without ...
Roles of the SPL gene family and miR156 in the salt stress responses of tamarisk (Tamarix chinensis)
abscisic acid insensitivity grey poplar isotope discrimination stomatal conductance transpiration unsaturation
2024/2/27
Accumulating evidences show that SPLs are crucial regulators of plant abiotic stress tolerance and the highly conserved module miR156/SPL appears to balance plant growth and stress responses. The halo...